BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006F09LP1|AL425571
(981 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1898 0.0
>3x_Contig1766
Length = 23951
Score = 1898 bits (956), Expect = 0.0
Identities = 975/981 (99%), Gaps = 1/981 (0%)
Strand = Plus / Plus
Query: 1 gatcatcttcatctttaatcgctactccgtatctattccgtatccactccgttagtgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gatcatcttcatctttaatcgctactccgtatctattccgtatccactccgttagtgact 639
Query: 61 ccgtagcctctccattatctggtttcccattttactctttgtttcctctctcgatggcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ccgtagcctctccattatctggtttcccattttactctttgtttcctctctcgatggcaa 699
Query: 121 ttacaagatagctaattactatcacatctctgagttctcaacagaaacaggaaaaaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ttacaagatagctaattactatcacatctctgagttctcaacagaaacaggaaaaaaata 759
Query: 181 atgacccattcttttcttaattgatacatgttttcgattactttctaagcgaatgaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 atgacccattcttttcttaattgatacatgttttcgattactttctaagcgaatgaatga 819
Query: 241 atgatcatcgttcttatttatccatattgtaattagtgaggggaaaacaatgatttgact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 atgatcatcgttcttatttatccatattgtaattagtgaggggaaaacaatgatttgact 879
Query: 301 tgatggaatagtatttaaatagacaagagttttgtaactgttggacatcatgtgagtttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 tgatggaatagtatttaaatagacaagagttttgtaactgttggacatcatgtgagtttg 939
Query: 361 aagtatggtgtatttatataataattatgtttatatgttagttgttggctaatactagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 aagtatggtgtatttatataataattatgtttatatgttagttgttggctaatactagta 999
Query: 421 atcaaacacaattatctaacagggtgacagaggtagtagtgatataaaaatccatatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 atcaaacacaattatctaacagggtgacagaggtagtagtgatataaaaatccatatttt 1059
Query: 481 gtgccaaatgtctcctgctgttgataccgcttccaccgccaaagatccaatctcagtcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1060 gtgccaaatgtctcctgctgttgataccgcttccaccgccaaagatccaatctcagtcat 1119
Query: 541 gaaatctaacgcttcagctgccgctgcagaccaaattaagacccatgaatacgaacattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1120 gaaatctaacgcttcagctgccgctgcagaccaaattaagacccatgaatacgaacattt 1179
Query: 601 aacttctgtgcctatagtgcagcctctaccaattactgataggttgagcagcgaa-sagc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1180 aacttctgtgcctatagtgcagcctctaccaattactgataggttgagcagcgaagcagc 1239
Query: 660 ncaaaaatataaacctaatttgccaggtgggttcgaagagtacaagtctttgcacaagga 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1240 tcaaaaatataaacctaatttgccaggtgggttcgaagagtacaagtctttgcacaagga 1299
Query: 720 atcacttgaaaatccagccaagttttaccatgaacgtgctcagctgttgaattggttcaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1300 atcacttgaaaatccagccaagttttaccatgaacgtgctcagctgttgaattggttcaa 1359
Query: 780 accatacgatcaagttttcatcccagataccgaagtaaaaccaacttttgagaacaacgc 839
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1360 accatacgatcaagttttcatcccagataccgaaggtaaaccaacttttgagaacaacgc 1419
Query: 840 ttggtttaccaacggtcaattgaacgcttgttacaatttggtagacagacatgccttcac 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1420 ttggtttaccaacggtcaattgaacgcttgttacaatttggtagacagacatgccttcac 1479
Query: 900 tcaaccaaacaaggttgccattctttatgaagctgatgaaccaggtcaaggttatagtct 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1480 tcaaccaaacaaggttgccattctttatgaagctgatgaaccaggtcaaggttatagtct 1539
Query: 960 cacttatgcgggattgttaga 980
||||||||||| |||||||||
Sbjct: 1540 cacttatgcggaattgttaga 1560
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7900
Number of Sequences: 1807
Number of extensions: 7900
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 981
length of database: 10,358,551
effective HSP length: 16
effective length of query: 965
effective length of database: 10,329,639
effective search space: 9968101635
effective search space used: 9968101635
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)